This is either a problem of your Reader or printer driver. I would try to create the booklet through printer driver itself not by the Reader. So in the print dialog turn off the settings for booklets so it the looks like you're printing a single page. Then you press the [Properties] button to open printer driver dialog. There you should also find on option for booklet printing.
If you driver doesn't have such option try the other way again, but then activate the "print as image" option under the [Advanced] settings.