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Original file is a 12 min. 4K 30fps iPhone video that plays back without any problems.
After editing down to under 6 min. and doing some color correction in AE, every attempt at rendering in Media Encoder, no matter what codec I choose (including ProRes 4444), always results in certain sections of the video playing back stuttering at a reduced frame rate. Those sections are always the same in each instance. I also tried reducing the resolution in ME to HD and get the same stuttered result.
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Sorry for your issues. Did the direct export from Ae work?
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Please use the free MediaInfo and post a screenshot of the properties of your original media in tree view:
https://mediaarea.net/en/MediaInfo
Many users are having issues with VFR. If the file is variable frame rate, use Handbrake to convert to constant frame rate before importing into Premiere Pro:
https://handbrake.fr/downloads.php
Here is a tutorial:
https://www.youtube.com/watch?time_continue=34&v=xlvxgVREX-Y
Shutter Encoder may also be used to convert to Constant Frame Rate:
https://www.shutterencoder.com/en/