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I'm on Mac OS X Big Sur 11.2.3 using Lightroom Classic 10.2.
I'm importing photos from my Fujifilm X-pro3 using an SD card with card reader and Lightroom's import function.
I'm using the exact same camera setup as I was a few months ago, yet those images are combining as expected. In my Lightroom preferences, I have "Treat JPEG files next to raw files as separate photos" unchecked. When I check this option, my previous imports get the separate treatment (as expected), and when I uncheck it, those older imports combine again. However, imports from the last few months show no change.
The following album shows this issue with two photos as well as a screenshot of my preferences: https://imgur.com/a/GwM9CzU
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I notice in your first screen shot, you have selected photo "DSCF3010.RAF," yet the image info in the Loupe view shows "DSCF3008.JPG." This is quite strange behavior as well.
I wonder if resetting your preferences would help?
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>When I check this option, my previous imports get the separate treatment (as expected), and when I uncheck it, those older imports combine again. However, imports from the last few months show no change.
This setting only affects new imports. It will not affect any imports that have already happened.