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Previously, when I selected the background color it became transparent in the preview. But now I select the green screen and it doesn't change. If I render the video, it does disappear, but before I didn't need to render it. Pls help.
Before (ignore green line, it's an example)
 
Now
 
That was the problem. Solved. Thanks. 
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Looks like you've got Composite selected under output so that's right. Can you clear your render cache?
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Thanks but it still doesn't work, I deleted the render cache as you said, but nothing.
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The error appeared when using the comparison view. When I activate the comparison view again, the green screen disappears, but if I deactivate it, it reappears.
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That was the problem. Solved. Thanks. 
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Thanks for the follow up! Good find.
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