How create clipping mask but with several shapes?

Hi, you can select the area's that you want to use (without the shapes in the middle) and copy this on a new layer using Layer > New > Layer via copy. Now put the image layer on top and make the clipping mask with Layer > Create clipping mask. Or alt/option click between the two layers. 

»i know you can do with the clipping mask tool«

«Tool« has a specific meaning in the context of Photoshop and it does not feazure a »Clipping Mask Tool«. 

»I also want the shapes in the middle of the images to crop out«

What do you mean? 

Please post a screenshot or sketch. 

Hi , to make clipping mask as a whole put the file in folder then do clipping on it very simple... hope it helps.

Regards