Open a PDF with javascript enabled (even if it is disabled in the registry)

On company computers Javascript execution in Acrobat is disabled by default (in registry bDisableJavaScript -Value '1') BUT... we have a custom application that needs to run certain PDF files allowing Javascript execution.
At the moment the user has to allow the javascript manually when opening the file, by clicking on the top bar.
Is there a way for the application to open the file passing the instruction not to block javascript ?

thank you!