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I don't know if you've solved this issue, but perhaps this info will help the next person like myself coming across this thread. Basically the issue is that the original FBX file you exported from UE5 contains all the meshes for each LOD. You can open that same fbx file in blender and then remove all but the one you need to import into Substance Painter. Currently I can't figure out how to remove the eyelashes in blender, but hopefully this can help someone.
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