Manual eye movement and blinking

I've used prerecorded iphone movies to control a puppet.
The extracted audio can make the mouth move in sync.
The after effects tracking data fails at the eyes: CH pushes the pupils downwards when I blink my eyes. That is the only thing it does and that is useless. No lively eyes at all.
I can't use a webcam so I now must animate the eyes manually and add blinks. What is the way to do that?