This is my typical clip view
On the clip I am trying to edit you can see Position and Scale have disappeared.
I have tried looking under preferences as well as in effects. I have even tried changing my workspace? I can not seem to have it return? Any suggestions?
When you say "on certain clips" do those clips have anything in common? What are those clips?
If you create a new sequence and place a suspect clip in it, does the problem remain?
If you create a new project and create a new sequence and place a suspect clip in it, does the problem remain?
The usual first step when Premiere Pro acts unexpectedly to trash your preferences, take a look at this:
MtD
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