In working with images opened from camera raw as smart objects, I often find that I would like to re-open one or more of the individual images in camera raw to make changes, perhaps in exposure , or to remove something that I didn't notice before. At present, I have to open the images as "not smart" (dumb?) layers in order to do the alignment, then convert the layer I want to modify to a smart object and use the camera raw filter. It would be so nice to have the align function work on the smart objects to do the geometric, free transform part of the alignment and then alow me to go back into camera raw to modify tone, light, etc.