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I'm looking for is a script that will automate the process Auto Trace within my work area?(Alpha png to Masks) Without UI
step 1 To step 4
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Depending on what you want to do there would be 2 built-in ways. If you want to effect a layer or pre-comp there is a filter (I think called "Set Matte under Channels"
There is also a switch labeled with a "T" next to Track matte that will allow you to use the alpha to effect layers above