You can use the Indesign Document, then export to PDF for a slide presentation. There are some things you would set in Indesign and other things you would set in Acrobat. Content would be edited in Indesign. You can set transitions between slides, this can be done in either app, but keep in mind, to view transitions, the presentation needs to run in full screen. Full Screen mode is set in Acrobat's Document Properties. You can set a presentation to automatically cycle through slides. But this is an application preference, and if you are sending the document to some else, they would have to set the preference for looping and time advancement.
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